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An Information Portal to Biological Macromolecular Structures. Validation and Deposition Services Home. RCSB PDB Data Validation and Deposition Services. Please use the wwPDB Deposition Tool. To submit new crystal structure data. The following data deposition tools.
FireDB is a database of Protein Data Bank. Structures, ligands and annotated functional site residues. The database can be accessed by PDB codes or UniProt. Accession numbers as well as keywords. Predicts functionally important residues based on the FireDB database. The predictions are based on the local evaluation of alignments between the query sequence and the structures with functional information that are stored in FireDB.
Who is Using It? Open-Source Computational Structural Biology Framework. The Framework at a Glance. Work with proteins, nucleic acids and ligands. Image Processing in 2 and 3 dimensions. Work with sequence data of various kinds. Write scripts to automate your workflows. For your platform and read the tutorials. Biozentrum, University of Basel.
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Version 1 Updated 26-Jan-2016. The Ligand Expo Tutorial. Contains a summary of query, report and download features. Menu to find a chemical component or build a new chemical component. Menu to view tabulations of modified amino acids and nucleotides. For links to chemical dictionaries and resource files. For a brief tutorial on the content of the Chemical Component Dictionary.CONTENT
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